MirGeneDB 3.0

MirGeneDB ID

Hvu-Mir-3010

Family name MIR-3010 (all species)
Seed GAGAGCG
Species Freshwater-polyp (Hydra vulgaris)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. vulgaris
Node of Origin (family) H. vulgaris
Genome context
(Hm105_1.0)
Sc4wPfr_1021: 42949-42998 [+]
Precursor
(pre-Mir +30nt flank)
AAUUACCAAAAUAAUUUUAAAAUCUAGGCAAAUUUAUUUAUGCGCUCUGAUUUAAAAAUGAGAGCGCAAAAAUAAAUUUGCAUAGAAUUAUUUGAAGAAUUACCAAAAAG
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Structure
        10        20          30        40        50    
AAUUACCAAAAUAAUUUUAAAA--|   G            A        G   U 
                        UCUA GCAAAUUUAUUU UGCGCUCU AUU A
                        AGAU CGUUUAAAUAAA ACGCGAGA UAA A
GAAAAACCAUUAAGAAGUUUAUUA^   A            A        G   A 
.       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fo Fo Fo Un
Star sequence

Hvu-Mir-3010_5p*

mirBase accessionNone
Sequence
0- AAUUUAUUUAUGCGCUCUGAUU -22
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Mature sequence

Hvu-Mir-3010_3p

mirBase accessionNone
Sequence
28- UGAGAGCGCAAAAAUAAAUUUG -50
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