MirGeneDB 3.0

MirGeneDB ID

Hvu-Novel-15

Family name HVU-NOVEL-15 (all species)
Seed GACAUAG
Species Freshwater-polyp (Hydra vulgaris)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. vulgaris
Node of Origin (family) H. vulgaris
Genome context
(Hm105_1.0)
Sc4wPfr_226.1: 1498610-1498660 [+]
Precursor
(pre-Mir +30nt flank)
CAUUACAGCAACUUAAAAAGUAGUUGGUAAUGUCAGUUACCAAUUAUGUCAGUUAGUAACUGACAUAGUUAGUACUACAUUAACAACUAUUUUUCACUGAUUUGUGAACCG
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Structure
        10          20        30        40        50      
CAUUACAGCAACUUAAA--|        G      C   U  C            UA 
                   AAGUAGUUG UAAUGU AGU AC AAUUAUGUCAGU  \
                   UUUAUCAAC AUUACA UCA UG UUGAUACAGUCA  G
GCCAAGUGUUUAGUCACUU^        A      -   -  A            AU 
 .       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fo Fo Fo Un
Star sequence

Hvu-Novel-15_5p*

mirBase accessionNone
Sequence
0- UGUCAGUUACCAAUUAUGUCAGU -23
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Mature sequence

Hvu-Novel-15_3p

mirBase accessionNone
Sequence
30- UGACAUAGUUAGUACUACAUU -51
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