MirGeneDB ID | Hvu-Novel-6 |
Family name |
HVU-NOVEL-6 (all species) |
Seed |
AGAUUAA |
Species |
Freshwater-polyp (Hydra vulgaris) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
H. vulgaris
|
Node of Origin (family) |
H. vulgaris
|
Genome context (Hm105_1.0) |
Sc4wPfr_275: 235406-235456 [-]
|
Precursor (pre-Mir +30nt flank) |
UUAAAUACAGAUCACUGAUGUAGAUAGAUGUAGAUUAAAUGUAGGCGAUAUAUGAAAUAUAUCAUCUACAUUUAAUCAACAUUUAUCUACAUGUCUACUAUCAACAUAUUU
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|
Structure | 10 20 30 40 50
UUAAAUACAGAUCACUG--| A GC UG
AUGUAGAUAGAUGU GAUUAAAUGUAG GAUAUA \
UACAUCUAUUUACA CUAAUUUACAUC CUAUAU A
UUUAUACAACUAUCAUCUG^ A UA AA
. 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Hvu-Novel-6_5p |
mirBase accession | None |
Sequence |
0- UAGAUUAAAUGUAGGCGAUAUA -22
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|
Star sequence |
Hvu-Novel-6_3p* |
mirBase accession | None |
Sequence |
29- UAUCAUCUACAUUUAAUCAACA -51
Get sequence
|