MirGeneDB 3.0

MirGeneDB ID

Hvu-Novel-6

Family name HVU-NOVEL-6 (all species)
Seed AGAUUAA
Species Freshwater-polyp (Hydra vulgaris)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. vulgaris
Node of Origin (family) H. vulgaris
Genome context
(Hm105_1.0)
Sc4wPfr_275: 235406-235456 [-]
Precursor
(pre-Mir +30nt flank)
UUAAAUACAGAUCACUGAUGUAGAUAGAUGUAGAUUAAAUGUAGGCGAUAUAUGAAAUAUAUCAUCUACAUUUAAUCAACAUUUAUCUACAUGUCUACUAUCAACAUAUUU
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Structure
        10          20        30        40        50     
UUAAAUACAGAUCACUG--|             A            GC      UG 
                   AUGUAGAUAGAUGU GAUUAAAUGUAG  GAUAUA  \
                   UACAUCUAUUUACA CUAAUUUACAUC  CUAUAU  A
UUUAUACAACUAUCAUCUG^             A            UA      AA 
 .       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fo Fo Fo Un
Mature sequence

Hvu-Novel-6_5p

mirBase accessionNone
Sequence
0- UAGAUUAAAUGUAGGCGAUAUA -22
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Star sequence

Hvu-Novel-6_3p*

mirBase accessionNone
Sequence
29- UAUCAUCUACAUUUAAUCAACA -51
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