| MirGeneDB ID | Lch-Mir-128-P3 |
|---|---|
| Family name | MIR-128 (all species) |
| Seed | CACAGUG |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-128-P1 Lch-Mir-128-P2 |
| Orthologues | Cmi-Mir-128-P3 Ebu-Mir-128 Pma-Mir-128-o3 Sto-Mir-128-P3 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH127045.1: 803760-803818 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGAGCUGGCGUUCUUCGAGGUUGUGGAAAGGGGACCGUGCCACUGUCUGGGAGGGAGUAGCAGGCUCUCACAGUGAACCGGUCUCUCUUCCUCGGCUUUCAUUUCCAGCACGAGCACAGet precursor sequence |
| Structure | 10 20 30 40 50 UGGAGCUGGCGUUCUUC--| U AG UGC CU GAGGGAG GAGGUUG GGAA GGGACCG CACUGU GG \ UUUCGGC CCUU CUCUGGC GUGACA CU U ACACGAGCACGACCUUUAC^ U CU CAA CU CGGACGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Lch-Mir-128-P3_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GGGGACCGUGCCACUGUCUGG -21
Get sequence
|
| Mature sequence | Lch-Mir-128-P3_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UCACAGUGAACCGGUCUCUCU -59
Get sequence
|
