| MirGeneDB ID | Lch-Mir-140-P4 |
|---|---|
| Family name | MIR-140 (all species) |
| Seed | ACCACAG |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-140-P2 |
| Orthologues | Ebu-Mir-140-P4-v1 Ebu-Mir-140-P4-v2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH127891.1: 481510-481571 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UUGUCCGUCUCUUGUUGCUAGGCGACCUGCCAGUGGUUUUACCUUAUGGUAGGUUUGGAUGUUCAGUUCUACCACAGGGUAGAACCACGGAUGGGUUGUUUAGACAGACUCGUCGCCCACCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 UUGUCCGUCUCUUGUUG-- -| A A GUUUGGA CUAGGCGACCUG CC GUGGUUUUACCUU UGGUAG U GAUUUGUUGGGU GG CACCAAGAUGGGA ACCAUC G ACCACCCGCUGCUCAGACA A^ - C UUGACUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Lch-Mir-140-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAGUGGUUUUACCUUAUGGUAG -22
Get sequence
|
| Mature sequence | Lch-Mir-140-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UACCACAGGGUAGAACCACGGAU -62
Get sequence
|
