MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-140-P4-v1

Family name MIR-140 (all species)
Seed CCACAGG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-140-P3-v1  Ebu-Mir-140-P3-v2  Ebu-Mir-140-P4-v2 
Orthologues Lch-Mir-140-P4 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02008842.1: 1778408-1778469 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGACGUCCAUAACCCUACUCGUGUGACGCUCAGUGGUUUUACCCUAUGGUAGAUCCAGCAAUAGCACACUACCACAGGGUAGAACCACGGGUGGAUACCGGGCCCUCGCAGCAGAUACAGAG
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Structure
        10           20         30        40        50        60
UGACGUCCAUAACCCUA---|   U   A-     A             A      AUCCAGC 
                    CUCG GUG  CGCUC GUGGUUUUACCCU UGGUAG       A
                    GGGC CAU  GUGGG CACCAAGAUGGGA ACCAUC       A
GAGACAUAGACGACGCUCCC^   -   AG     -             C      ACACGAU 
120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-140-P4-v1_5p*
mirBase accessionNone
Sequence 
0- CAGUGGUUUUACCCUAUGGUAG -22
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Mature sequence

Ebu-Mir-140-P4-v1_3p
mirBase accessionNone
Sequence 
40- ACCACAGGGUAGAACCACGGGU -62
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