MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-12588

Family name MIR-12588 (all species)
Seed GUGAUAG
Species Owl limpet (Lottia gigantea)
MiRBase ID
Paralogues
Orthologues Hru-Mir-12588 
Node of Origin (locus) Gastropoda
Node of Origin (family) Gastropoda
Genome context
(Lotgi1)		 LOTGIsca_13: 796803-796862 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCUAGAUUGUAAACAGCUGUCUAGAACUUGUGAUAGAGGUUGCAUUUGACUGUGUAUAACUAAUGGUAAAUGCAUCCUCUAUUACCACUUCUACGACAGACAUCCACGACAAUGAUAA
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Structure
        10         20         30        40        50          
UGUCUAGAUUGUAAACAG-     -|    CUU          U        A  GUGUAU 
                   CUGUC UAGAA   GUGAUAGAGG UGCAUUUG CU      \
                   GACAG AUCUU   CAUUAUCUCC ACGUAAAU GG      A
AAUAGUAACAGCACCUACA     C^    CAC          U        -  UAAUCA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Lgi-Mir-12588_5p
mirBase accessionNone
Sequence 
0- UGUGAUAGAGGUUGCAUUUGACU -23
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Star sequence

Lgi-Mir-12588_3p*
mirBase accessionNone
Sequence 
37- GUAAAUGCAUCCUCUAUUACCAC -60
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