MirGeneDB 3.0

MirGeneDB ID

Loc-Mir-430-o32

Family name MIR-430 (all species)
Seed AAGUGCU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-430-o31 
Orthologues Hsa-Mir-430-P32  Mml-Mir-430-P32a1  Mml-Mir-430-P32a2  Mml-Mir-430-P32b  Pab-Mir-430-P32 
Node of Origin (locus) L. oculatus
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)
LG7: 14528223-14528281 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUAAAAGAUGGGAAGCCCCACUUGAAUCGAACCUCGACUUUAGCACUGUUCUUGGUAUGAUAUUAGAAAGUGCUACCAAGUGGAGGUGUGAUCUGGUGUUGUAAUUGGCUUGGCUAUGG
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Structure
        10           20        30        40          50        
CUAAAAGAUGGGAAGCCC---    U A    A     G    --|      G    UGGUA 
                     CACU G AUCG ACCUC ACUU  UAGCACU UUCU     U
                     GUGG C UAGU UGGAG UGAA  AUCGUGA AAGA     G
GGUAUCGGUUCGGUUAAUGUU    U -    G     G    CC^      -    UUAUA 
       110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-430-o32_5p*

mirBase accessionNone
Sequence
0- ACCUCGACUUUAGCACUGUUCU -22
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Mature sequence

Loc-Mir-430-o32_3p

mirBase accessionNone
Sequence
36- AAAGUGCUACCAAGUGGAGGUGU -59
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