MirGeneDB ID | Mal-Mir-723-P2 |
Family name |
MIR-723 (all species) |
Seed |
GACAUCA |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
Mal-Mir-723-P1a
Mal-Mir-723-P1b
|
Orthologues |
Dre-Mir-723-P2
Gmo-Mir-723-P2
Tni-Mir-723-P2
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Clupeocephala
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884805.1: 360880-360937 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGAGGGCUGGUCUAUAAAGGCAUGGAUAAAGGCAGUUUUGAUGAUGUUACUUCUUUUAUUUUAAGAAGACAUCAGAAAAAUCUGUGCUUAUCCUUGUUUACGAUAUACGGACCCUCCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GGAGGGCUGGUCUAUAA-- U AG -| GA UA UUUUA
AGGCA GGAUAA GCAG UUUU UGAUGU CUUC \
UUUGU CCUAUU UGUC AAAA ACUACA GAAG U
UCCUCCCAGGCAUAUAGCA U CG U^ AG -- AAUUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mal-Mir-723-P2_5p* |
mirBase accession | None |
Sequence |
0- GGCAGUUUUGAUGAUGUUACUUC -23
Get sequence
|
Mature sequence |
Mal-Mir-723-P2_3p |
mirBase accession | None |
Sequence |
36- AGACAUCAGAAAAAUCUGUGCU -58
Get sequence
|