| MirGeneDB ID | Tni-Mir-723-P2 |
|---|
| Family name |
MIR-723 (all species) |
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| Seed |
GACAUCA |
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| Species |
Pufferfish (Tetraodon nigroviridis) |
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| MiRBase ID |
|
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| Paralogues |
Tni-Mir-723-P1
|
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| Orthologues |
Dre-Mir-723-P2
Gmo-Mir-723-P2
Mal-Mir-723-P2
|
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| Node of Origin (locus) |
Clupeocephala
|
|---|
| Node of Origin (family) |
Clupeocephala
|
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Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel) |
2: 3615741-3615798 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGGGCUGGUCUAUAAAGGCAUGGAUAAAGGCAGUUUUGAUGAUGUCACUUCUUUUAUUUUAAGAAGACAUCAGAUAAAUCUGUGCUUAUCCUUGUUGAGAUAUACGUACCCUCCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAGGGCUGGUCUAUAAA-- U AG U A-| AC UUUUA
GGCA GGAUAA GCAG UUUG UGAUGUC UUC \
UUGU CCUAUU UGUC AAAU ACUACAG AAG U
CUCCUCCCAUGCAUAUAGAG U CG U AG^ -- AAUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Tni-Mir-723-P2_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGCAGUUUUGAUGAUGUCACUUC -23
Get sequence
|
|---|
| Mature sequence |
Tni-Mir-723-P2_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- AGACAUCAGAUAAAUCUGUGCU -58
Get sequence
|
|---|
