| MirGeneDB ID | Mdo-Mir-7251 |
|---|
| Family name |
MIR-7251 (all species) |
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| Seed |
CUAAGCU |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7251
|
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| Paralogues |
|
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| Orthologues |
Sha-Mir-7251
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(monDom5_add) |
1: 366217902-366217964 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUGCCCUCUUCAUCAUAUCACAUGGCAAGGACUAAGCUGGGUGGAUAGUCAAUGCUAAAUAUCCCAAUCCUGACUAUCUACUUAGCUUAGUCCUGGCUCUGUGAUGUCGCACCUGUAUGCUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUGCCCUCUUCAUCAUA--| U A AUGCUAAAU
UCACA GGC AGGACUAAGCUGGGUGGAUAGUCA \
AGUGU UCG UCCUGAUUCGAUUCAUCUAUCAGU A
UAUCGUAUGUCCACGCUGU^ C G CCUAACCCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Mdo-Mir-7251_5p |
| mirBase accession | MIMAT0028468 |
|---|
| Sequence |
0- ACUAAGCUGGGUGGAUAGUCA -21
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7251-5p
|
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| Star sequence |
Mdo-Mir-7251_3p* |
| mirBase accession | MIMAT0028469 |
|---|
| Sequence |
42- ACUAUCUACUUAGCUUAGUCC -63
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7251-3p
|
|---|
