| MirGeneDB ID | Mdo-Mir-7286 |
|---|
| Family name |
MIR-7286 (all species) |
|---|
| Seed |
AUUUUAG |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7286
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-7286
Sha-Mir-7286
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(monDom5_add) |
3: 410851524-410851584 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAAGACAAAAGCGAAACAGUCCCUGCCCUCGAGGAGCUUACAUUCUACUGGGGGAGUUCUUGGAACCUAUUUUAGAUUAUAAGCUCCUGGAGGGAAGAGGCCACGUCUACAUAUCUUGCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAGACAAAAGCGAAACA-- C G G CAU C--| GGAGUU
GUC CU CCCUC AGGAGCUUA UCUA UGGG \
CGG GA GGGAG UCCUCGAAU AGAU AUCC C
CUCGUUCUAUACAUCUGCAC A A G AUU UUU^ AAGGUU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7286_5p* |
| mirBase accession | MIMAT0028548 |
|---|
| Sequence |
0- GAGGAGCUUACAUUCUACUGGG -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7286-5p
|
|---|
| Mature sequence |
Mdo-Mir-7286_3p |
| mirBase accession | MIMAT0028549 |
|---|
| Sequence |
37- UAUUUUAGAUUAUAAGCUCCUGGA -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7286-3p
|
|---|
