MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-7293

Family name MIR-7293 (all species)
Seed CGCUGGG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7293
Paralogues
Orthologues Neu-Mir-7293  Sha-Mir-7293 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
3: 362140420-362140476 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCUGCUGUUCAGAGUAGCAGGUGAUGGGCAGCAGAAAUGCCCCAGCUCCCAGUGGUAAUAGACAGGCGCUGGGGAAUUUCUGCCACCUGUCAGCUCUGCUUUCAGCGGCAGAGCUA
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Structure
        10           20        30        40        50        
GGCUGCUGUUCAGAGUA---|C  G       CA        G       U  CAGUGGU 
                    G AG UGAUGGG  GCAGAAAU CCCCAGC CC       \
                    C UC ACUGUCC  CGUCUUUA GGGGUCG GG       A
AUCGAGACGGCGACUUUCGU^-  G       AC        A       C  ACAGAUA 
     110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7293_5p*

mirBase accessionMIMAT0028570
Sequence
0- AGCAGAAAUGCCCCAGCUCCC -21
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Proposed targets TargetScanVert: mdo-miR-7293-5p
Mature sequence

Mdo-Mir-7293_3p

mirBase accessionMIMAT0028571
Sequence
36- GCGCUGGGGAAUUUCUGCCAC -57
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Proposed targets TargetScanVert: mdo-miR-7293-3p