| MirGeneDB ID | Mdo-Mir-7327 |
|---|
| Family name |
MIR-7327 (all species) |
|---|
| Seed |
GCGAUUU |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7327
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-7327
Sha-Mir-7327
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(monDom5_add) |
6: 243825029-243825089 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAAGGCUCCAGCUCCUGGUGUGGGACCUUGGGAGGGGUUGAAGACUCGCCCCCUAUCCUGACUCUGAGGGGCGAUUUUACAACCCUUCCCACGAUUCUGCUACCAAACCCAAAGACAAACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAGGCUCCAGCUCCUG- -|UG CCU A C CUAUCCU
GU G GGA UGGGAGGGGUUG AGA UCGCCCC \
CA C CUU ACCCUUCCCAAC UUU AGCGGGG G
UCAAACAGAAACCCAAAC U^GU AGC A U AGUCUCA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7327_5p* |
| mirBase accession | MIMAT0028656 |
|---|
| Sequence |
0- GGAGGGGUUGAAGACUCGCCCC -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7327-5p
|
|---|
| Mature sequence |
Mdo-Mir-7327_3p |
| mirBase accession | MIMAT0028657 |
|---|
| Sequence |
39- GGCGAUUUUACAACCCUUCCCA -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7327-3p
|
|---|
