| MirGeneDB ID | Mdo-Mir-7329 |
|---|
| Family name |
MIR-7329 (all species) |
|---|
| Seed |
GGCCAAU |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7329
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-7329
Sha-Mir-7329
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(monDom5_add) |
6: 282778002-282778062 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGCCGAAGAGCUUGGCACGCCCCCCGGGUGAGCAUUCUCAUUUGGCCCUUCUCGUUCCCUCAAGGCGAAGGCCAAUGGCAAUGCUUCCUCAGGGUGUGCUGCCAGGGGCCCCUGGAGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGCCGAAGAGCUUGG----| CCC UG C U C UCGUUCC
CACGCCC GGG AGCAUU UCAUU GGCC UUC \
GUGUGGG CUC UCGUAA GGUAA CCGG AAG C
UCGAGGUCCCCGGGGACCGUC^ A-- CU C - - CGGAACU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7329_5p* |
| mirBase accession | MIMAT0028660 |
|---|
| Sequence |
0- UGAGCAUUCUCAUUUGGCCCUUC -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7329-5p
|
|---|
| Mature sequence |
Mdo-Mir-7329_3p |
| mirBase accession | MIMAT0028661 |
|---|
| Sequence |
40- AGGCCAAUGGCAAUGCUUCCU -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7329-3p
|
|---|
