| MirGeneDB ID | Mdo-Mir-7336 |
|---|
| Family name |
MIR-7336 (all species) |
|---|
| Seed |
CGCACAC |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7336
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-7336
Sha-Mir-7336
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(monDom5_add) |
7: 86952927-86952986 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AACACCAUAAGAAAAUCCUGAGCAGCAGUCUGUGGAUGCAAAGUGUGCGAUGCUGCUAUAUGAAACGCCGCACACUACUGAAUCCUCAGACUGCUACUCAGUGUCUCCUUCAGCACUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACACCAUAAGAAAAUC-- C U G A-| A CUGCUA
CUGAG AGCAGUCUG GGAU CA AGUGUGCG UG \
GACUC UCGUCAGAC CCUA GU UCACACGC GC U
AUUUCACGACUUCCUCUGU A U A CA^ C AAAGUA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7336_5p* |
| mirBase accession | MIMAT0028680 |
|---|
| Sequence |
0- UGUGGAUGCAAAGUGUGCGAUG -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7336-5p
|
|---|
| Mature sequence |
Mdo-Mir-7336_3p |
| mirBase accession | MIMAT0028681 |
|---|
| Sequence |
37- CCGCACACUACUGAAUCCUCAGA -60
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7336-3p
|
|---|
