| MirGeneDB ID | Mdo-Mir-7368 |
|---|
| Family name |
MIR-7368 (all species) |
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| Seed |
GAGUAGG |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7368
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-7368
Sha-Mir-7368
|
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(monDom5_add) |
X: 26897673-26897733 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUGACUCUUGACUCAGUCUGGAGCUGAGCCUGAGUAGGAGAAGGGCUGUGGAUCUGUAACUGAGGUGGUCACCAGCUCACCUUCUGCCUAGCUCUGCUCCCAGCACCCCACCAAGCUUCGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUGACUCUUGACUCAGU- -| U C A AA UG UGUAA
CU GGAGC GAGC UG GUAGGAG GGGCUG GAUC C
GA CCUCG CUCG AU CGUCUUC CUCGAC CUGG U
AGCUUCGAACCACCCCAC C^ U - C CA CA UGGAG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Mdo-Mir-7368_5p |
| mirBase accession | MIMAT0028758 |
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| Sequence |
0- UGAGUAGGAGAAGGGCUGUGGAUC -24
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7368-5p
|
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| Star sequence |
Mdo-Mir-7368_3p* |
| mirBase accession | MIMAT0028759 |
|---|
| Sequence |
38- UCACCAGCUCACCUUCUGCCUAG -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7368-3p
|
|---|
