MirGeneDB ID | Mml-Mir-1252 |
Family name |
MIR-1252 (all species) |
Seed |
GAAGGAA |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-1252
Pab-Mir-1252
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014346.1: 79029258-79029316 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUAAGUUGAGAAAAAAUGUGAGGUGUAGAAAGAAGGAAGCUGAAUUCAUUUAGAAAAGAGAAUGCCAAAUGAGCUUAAUUUCCUUUUUUCUAAAUCUUAAUAAUCUGCCUUGCUUUUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GUAAGUUGAGAAAAAAUG--| G C A AGAAAAG
UGAGGU UAGAAAGAAGGAAG UGA UUCAUUU \
AUUCUA AUCUUUUUUCCUUU AUU GAGUAAA A
UCUUUUCGUUCCGUCUAAUA^ A A C CCGUAAG
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
|
|
|
Mature sequence |
Mml-Mir-1252_5p (predicted) |
mirBase accession | None |
Sequence |
0- AGAAGGAAGCUGAAUUCAUUUA -22
Get sequence
|
Star sequence |
Mml-Mir-1252_3p* (predicted) |
mirBase accession | None |
Sequence |
37- AAUGAGCUUAAUUUCCUUUUUU -59
Get sequence
|