| MirGeneDB ID | Pab-Mir-1252 |
|---|---|
| Family name | MIR-1252 (all species) |
| Seed | GAAGGAA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-1252 Mml-Mir-1252 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 77628170-77628228 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GUAAGUUGACAAAAAAUGUGAGGUGUAGAAAGAAGGAAGUUGAAUUCAUUUAGAAAAGAGAAUUCCAAAUGAGCUUAAUUUCUUUUUUUCUAAAUCUUAAUAAUCUACCUUGCUUUUCUGet precursor sequence |
| Structure | 10 20 30 40 50 GUAAGUUGACAAAAAAUG--| G A AGAAAAG UGAGGU UAGAAAGAAGGAAGUUGA UUCAUUU \ AUUCUA AUCUUUUUUUCUUUAAUU GAGUAAA A UCUUUUCGUUCCAUCUAAUA^ A C CCUUAAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-1252_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGAAGGAAGUUGAAUUCAUUUA -22
Get sequence
|
| Star sequence | Pab-Mir-1252_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AAUGAGCUUAAUUUCUUUUUUU -59
Get sequence
|
