MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-1941-v2

Family name MIR-1941 (all species)
Seed GGGAGAU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1941
Paralogues Mmu-Mir-1941-v1 
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr15: 101369364-101369422 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1941-v2)		 Mir-1941-v1 chr15: 101369363-101369423 [+] UCSC Ensembl
Mir-1941-v2 chr15: 101369364-101369422 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGAUGAAUGGGGAAAGCCAGCAGGGUGGGAGGGAGAUGCUGGUACAGAGGCUUGGGGUUUUGAGGGCAUCUUAGCAGUAUCUCCCAUCCACCCACCUGGGCAGAAGUCAGCAGGCCAC
Get precursor sequence
Structure
        10          20        30        40        50         
CGGAUGAAUGGGGAAAG--|   CA      GA           G  C   G    GGGG 
                   CCAG  GGGUGG  GGGAGAUGCUG UA AGA GCUU    U
                   GGUC  CCCACC  CCCUCUAUGAC AU UCU CGGG    U
CACCGGACGACUGAAGACG^   CA      UA           G  -   A    AGUU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-1941-v2_5p
mirBase accessionMIMAT0009405
Sequence 
0- AGGGAGAUGCUGGUACAGAGGCUU -24
Get sequence
Proposed targets microrna.org: MIMAT0009405
TargetScanVert: mmu-miR-1941-5p
miRDB: MIMAT0009405
Star sequence

Mmu-Mir-1941-v2_3p*
mirBase accessionMIMAT0009406
Sequence 
37- CAUCUUAGCAGUAUCUCCCAUC -59
Get sequence
Proposed targets microrna.org: MIMAT0009406
TargetScanVert: mmu-miR-1941-3p
miRDB: MIMAT0009406