MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-3093

Family name MIR-3093 (all species)
Seed GUGGACA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3093
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr3: 88215186-88215247 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3093)		 Mir-3093 chr3: 88215186-88215247 [+] UCSC Ensembl
Mir-9-P3 chr3: 88215613-88215674 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGGAGCAGCUCUGCGAGCUCGGCUCUGCCGCACCCCGCGGAGCUCACACUCGACCUUCCAGAGAAGGGUGUGGACACCGUGGGAGGUUGGGGAGGCCUCGGCCUAGGCUUCUGCGGUCUU
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Structure
        10        20         30          40        50        60
CUCGGAGCAGCUCUGCGA   C-   U  G  --| AC       AGC       CGACCUU 
                  GCU  GGC CU CC  GC  CCCGCGG   UCACACU       C
                  CGG  CCG GA GG  UG  GGGUGCC   GGUGUGG       C
UUCUGGCGUCUUCGGAUC   CU   -  G  GU^ GA       ACA       GAAGAGA 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-3093_5p*
mirBase accessionMIMAT0014907
Sequence 
0- CGCACCCCGCGGAGCUCACACU -22
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Proposed targets TargetScanVert: mmu-miR-3093-5p
miRDB: MIMAT0014907
Mature sequence

Mmu-Mir-3093_3p
mirBase accessionMIMAT0014908
Sequence 
40- UGUGGACACCGUGGGAGGUUGG -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-3093-3p
miRDB: MIMAT0014908