| MirGeneDB ID | Mun-Mir-12477 |
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| Family name |
MIR-12477 (all species) |
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| Seed |
GAGGCUU |
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| Species |
Microcaecilia (Microcaecilia unicolor) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Xla-Mir-12477-P1
Xla-Mir-12477-P2
Xtr-Mir-12477
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| Node of Origin (locus) |
Amphibia
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| Node of Origin (family) |
Amphibia
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Genome context
(Mun_miRNA_loci) |
Novel-2_NC_044033.1:484688944-484689087: 44-101 [-]
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Precursor
(pre-Mir +30nt flank) |
CCCGCUUCCAGCUAAUCAUUGAGGCUGCAUUGAGGCUUCCCACUUCAAGGCUGUGUUCUGACUCAUCCUGGAAGCUGGAAGCCUGGAUGCAUCCCCAAAGCAGAGCAAAAAGCAGCUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCCGCUUCCAGCUAAUCA--| A C G CA A C UGUU
UUG GG UGCAUU AGGCUUCC CUUC AGG UG C
AAC CC ACGUAG UCCGAAGG GAAG UCC AC U
GUCGACGAAAAACGAGACGA^ C U G UC G U UCAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | UGUG in loop |
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Tissue expression
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| Mature sequence |
Mun-Mir-12477_5p |
| mirBase accession | None |
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| Sequence |
0- UGAGGCUUCCCACUUCAAGGCUG -23
Get sequence
|
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| Star sequence |
Mun-Mir-12477_3p* |
| mirBase accession | None |
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| Sequence |
35- UCCUGGAAGCUGGAAGCCUGGAU -58
Get sequence
|
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