MirGeneDB 3.0

MirGeneDB ID

Mun-Mir-430-o43

Family name MIR-430 (all species)
Seed AAGUGCU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-430-o42  Mun-Mir-430-P1 
Orthologues Mml-Mir-430-P43 
Node of Origin (locus) M. unicolor
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)
430-o43_LR594633.1:436877910-436878173: 101-164 [+]
Precursor
(pre-Mir +30nt flank)
GAAUCCUCCUGGUGUAAAUGGACCCCUUCUGCUUUAACAUGAAAGCACUUUCUGUAUGCACUGAGAGUUGGUAAGUGCUUCCAUGUUAAAGUACAGGUGAAUCCUACUUUCUCAGUCAUAUCUU
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Structure
        10         20          30        40        50        60 
GAAUCCUCCUGGUGUAAAU-   CC--|  UC            A        U  GUAUGCA 
                    GGA    CCU  UGCUUUAACAUG AAGCACUU CU       C
                    CCU    GGA  AUGAAAUUGUAC UUCGUGAA GG       U
UUCUAUACUGACUCUUUCAU   AAGU^  C-            C        U  UUGAGAG 
  120       110       100         90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
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Star sequence

Mun-Mir-430-o43_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUUUAACAUGAAAGCACUUUCU -23
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Mature sequence

Mun-Mir-430-o43_3p (predicted)

mirBase accessionNone
Sequence
41- UAAGUGCUUCCAUGUUAAAGUAC -64
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