MirGeneDB 3.0
MirGeneDB ID

Nag-Novel-2-P5

Family name NAG-NOVEL-2 (all species)
Seed AAGGAAU
Species Thorny-headed worm 1 (Neoechinorhynchus agilis)
MiRBase ID
Paralogues Nag-Novel-2-P1  Nag-Novel-2-P2  Nag-Novel-2-P3  Nag-Novel-2-P4  Nag-Novel-2-P6  Nag-Novel-2-P7 
Orthologues
Node of Origin (locus) N.agilis
Node of Origin (family) N.agilis
Genome context
(N_agilis_genome_min1000_bacfree)		 k149_9498: 390-449 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGAUUCUGAAUUUGUUUCCAUAUCAAUGAAAGGAAUUUAAGAACUAAUCGAUGAAACAAAGUAUCGAUUGGUCUUAAAAUUCCUUUCAUUGAUCCCGAAUUGGUUUCCAAAUCAAUGA
Get precursor sequence
Structure
        10          20        30         40        50         
AUUGAUUCUGAAUUUGU--   CAU              -|      A       AUGAAA 
                   UUC   AUCAAUGAAAGGAA UUUAAGA CUAAUCG      C
                   AAG   UAGUUACUUUCCUU AAAUUCU GGUUAGC      A
AGUAACUAAACCUUUGGUU   CCC              A^      -       UAUGAA 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Na Na
Mature sequence

Nag-Novel-2-P5_5p
mirBase accessionNone
Sequence 
0- AAAGGAAUUUAAGAACUAAUCG -22
Get sequence
Star sequence

Nag-Novel-2-P5_3p*
mirBase accessionNone
Sequence 
38- AUUGGUCUUAAAAUUCCUUUCA -60
Get sequence