| MirGeneDB ID | Nag-Novel-2-P7 |
|---|
| Family name |
NAG-NOVEL-2 (all species) |
|---|
| Seed |
AACGAAU |
|---|
| Species |
Thorny-headed worm 1 (Neoechinorhynchus agilis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Nag-Novel-2-P1
Nag-Novel-2-P2
Nag-Novel-2-P3
Nag-Novel-2-P4
Nag-Novel-2-P5
Nag-Novel-2-P6
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
N.agilis
|
|---|
| Node of Origin (family) |
N.agilis
|
|---|
Genome context
(N_agilis_genome_min1000_bacfree) |
k149_9498: 657-716 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUGAUCCUGAAUUCGUUUCCUAGUCAAUGAAACGAAUUUAAGAACUAAUCGAUGAAACAAAGUAUCGAUUGGUCUUAAAAUUCCUUUCAUUGAUUCUGAAUUUGUUUCCGAAUCAAUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGAUCCUGAAUUCGU-- CU C -| A AUGAAA
UUC AGUCAAUGAAA GAA UUUAAGA CUAAUCG C
AAG UUAGUUACUUU CUU AAAUUCU GGUUAGC A
AGUAACUAAGCCUUUGUUU UC C A^ - UAUGAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Nag-Novel-2-P7_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAACGAAUUUAAGAACUAAUCG -22
Get sequence
|
|---|
| Star sequence |
Nag-Novel-2-P7_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AUUGGUCUUAAAAUUCCUUUCA -60
Get sequence
|
|---|
