| MirGeneDB ID | Neu-Mir-12467 |
|---|
| Family name |
MIR-12467 (all species) |
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| Seed |
UUUCUCC |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Mdo-Mir-12467
Sha-Mir-12467
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 144173827-144173886 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UGAAGAUCAAAUAGUAAUAGUAGUGUGGUCAUUUCUCCCCUUCAAAUUCGGGGUGGGGUAGAACAGCACCUGAACAGUGGAUAGAAAAGAUUAUUAUGUCAUCUUUCAACACUCAUCACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGAAGAUCAAAUAGUAAUAGUAGU--| A CC UUCAAA GUGGGGU
GUGGUC UUUCU CC UUCGGG A
UAUUAG AAAGA GG AAGUCC G
UCACUACUCACAACUUUCUACUGUAU^ A UA UGAC-- ACGACAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|---|
| Mature sequence |
Neu-Mir-12467_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AUUUCUCCCCUUCAAAUUCGGG -22
Get sequence
|
|---|
| Star sequence |
Neu-Mir-12467_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- UGAACAGUGGAUAGAAAAGA -60
Get sequence
|
|---|
