| MirGeneDB ID | Neu-Mir-12471 |
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| Family name |
MIR-12471 (all species) |
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| Seed |
ACGUGUG |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Sha-Mir-12471
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051816.1: 39947807-39947864 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAAGCACUUUCUCGAUGGUGCAUGUGUAUAUGUGCAUGCAUAUAGGUACAUAUAUGCAUCUAUUUGCACGUGUGUGCAUGCAUAUGUACACGUGUACAUGCAGGAGCUCCCAGGGCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACAAGCACUUUCUCGAUG--| G A UAUAUG
GUGCAUGUGUAUAUGUGCAUGCAUAUA GU CA C
CAUGUGCACAUGUAUACGUACGUGUGU CA GU A
UCGGGACCCUCGAGGACGUA^ G C UUAUCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Star sequence |
Neu-Mir-12471_5p* |
| mirBase accession | None |
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| Sequence |
0- AUGUGCAUGCAUAUAGGUACA -21
Get sequence
|
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| Mature sequence |
Neu-Mir-12471_3p |
| mirBase accession | None |
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| Sequence |
37- CACGUGUGUGCAUGCAUAUGU -58
Get sequence
|
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