| MirGeneDB ID | Neu-Mir-12472 |
|---|
| Family name |
MIR-12472 (all species) |
|---|
| Seed |
CCCCCGG |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-12472
Sha-Mir-12472
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 231078558-231078612 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGACGGAAGGCGGAAGCGGAGCGUGAGCUAGAGGCCGAGCCGGGGGAGCGGCUCUAGUAGCUCCCCCGGGCUCCGGACCUCGCCGGAAGAAGAGCGUUGCUGCCGCUGCCUGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGACGGAAGGCGGAAGCGGA GUGAG-- A-- - - -| GGCU
GC CU GAGG CC GAG CCGGGGGAGC C
CG GG CUCC GG CUC GGCCCCCUCG U
UGGUCCGUCGCCGUCGUUG-- AGAAGAA CCG A C G^ AUGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Neu-Mir-12472_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGAGGCCGAGCCGGGGGAGC -20
Get sequence
|
|---|
| Mature sequence |
Neu-Mir-12472_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UCCCCCGGGCUCCGGACCUCGCC -55
Get sequence
|
|---|
