| MirGeneDB ID | Neu-Mir-12473 |
|---|---|
| Family name | MIR-12473 (all species) |
| Seed | AUAUCAG |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Sha-Mir-12473-v1 Sha-Mir-12473-v2 |
| Node of Origin (locus) | Australidelphia |
| Node of Origin (family) | Australidelphia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051814.1: 55858228-55858287 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGGGGAGCCAGCAGGGAUGGCGCCCUGGGGCACUUGCCAGAUCCUGAGGUUCUUGGUGCCUACUAGAAUAUCAGAGCUGGCAGGAACUCCAGAGGUCAUCUGGUCCAACCCCCUCCUUUGet precursor sequence |
| Structure | 10 20 30 40 50 CAGGGGAGCCAGCAGGG---| GC - CA AUC G UGGUG AUG GCC CUGGGG CUUGCCAG CUGA GUUCU \ UAC UGG GACCUC GGACGGUC GACU UAAGA C UUUCCUCCCCCAACCUGGUC^ -- A AA GA- A UCAUC . 110 100 90 80 70 |
| Deep sequencing | |
| Comment | There is a second Drosha cut +1 on both arms. |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Neu-Mir-12473_5p* |
| mirBase accession | None |
| Sequence |
0- GCACUUGCCAGAUCCUGAGGUUCU -24
Get sequence
|
| Mature sequence | Neu-Mir-12473_3p |
| mirBase accession | None |
| Sequence |
37- AAUAUCAGAGCUGGCAGGAACUC -60
Get sequence
|
