MirGeneDB 3.0

MirGeneDB ID

Sha-Mir-12473-v2

Family name MIR-12473 (all species)
Seed ACUUGCC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-12473-v1 
Orthologues Neu-Mir-12473 
Node of Origin (locus) Australidelphia
Node of Origin (family) Australidelphia
Genome context
(DEVIL_add)
Precursor
(pre-Mir +30nt flank)
CACUUGCCAGAUCCUGAGGUUCUUGGUGCCUACUAGAAUAUCAGAGCUGGCAGGAACU
Get precursor sequence
Structure
          10        20         
CA--|       AUC    G     U   G 
    CUUGCCAG   CUGA GUUCU GGU C
    GGACGGUC   GACU UAAGA UCA C
UCAA^       GA-    A     -   U 
       50         40         30
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Sha-Mir-12473-v2_5p

mirBase accessionNone
Sequence
0- CACUUGCCAGAUCCUGAGGUUCU -23
Get sequence
Co-mature sequence

Sha-Mir-12473-v2_3p

mirBase accessionNone
Sequence
36- AAUAUCAGAGCUGGCAGGAACU -58
Get sequence