MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-12474

Family name MIR-12474 (all species)
Seed AUGAUGG
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Sha-Mir-12474 
Node of Origin (locus) Australidelphia
Node of Origin (family) Australidelphia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051818.1: 388929475-388929532 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAGAAGGCCCAGAAUCCCCUGUGAGGGGAGCUGGCCAGGGCUCUCACCCCCGGGGAUGGCAUGGGAUGAUGGCACGGGCCGGCUCCCCAAGCAGGGUCAGCGCAUCUGAAGGAAGG
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Structure
        10          20        30        40        50        
AAGAGAAGGCCCAGAAUC--|     GA            AGG   C   C   CGGGG 
                    CCCUGU  GGGGAGCUGGCC   GCU UCA CCC     A
                    GGGACG  CCCCUCGGCCGG   CGG AGU GGG     U
GGAAGGAAGUCUACGCGACU^     AA            GCA   U   A   UACGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-12474_5p*

mirBase accessionNone
Sequence
0- AGCUGGCCAGGGCUCUCACCCC -22
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Mature sequence

Neu-Mir-12474_3p

mirBase accessionNone
Sequence
36- GAUGAUGGCACGGGCCGGCUCC -58
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