| MirGeneDB ID | Sha-Mir-12474 |
|---|
| Family name |
MIR-12474 (all species) |
|---|
| Seed |
AUGAUGG |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-12474
|
|---|
| Node of Origin (locus) |
Australidelphia
|
|---|
| Node of Origin (family) |
Australidelphia
|
|---|
Genome context
(DEVIL_add) |
GL856627.1: 331-387 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAGUCAAGUUCUAGAAUCCUCUGUGAGGGGAGCUGGCCAGGGCUCUCAUUCCCAGGAUGGCAUGGGAUGAUGGCACGGGCCGGCUCCCCGAGCAGGGUCCACGCAUCUGCAGGAAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGUCAAGUUCUAGAAUC--| GA AGG C CAGGA
CUCUGU GGGGAGCUGGCC GCU UCAUUCC \
GGGACG CCCCUCGGCCGG CGG AGUAGGG U
GGAAGGACGUCUACGCACCU^ AG GCA U UACGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Sha-Mir-12474_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCUGGCCAGGGCUCUCAUUCC -22
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-12474_3p |
| mirBase accession | None |
|---|
| Sequence |
35- GAUGAUGGCACGGGCCGGCUCC -57
Get sequence
|
|---|
