| MirGeneDB ID | Neu-Mir-1541 |
|---|---|
| Family name | MIR-1541 (all species) |
| Seed | GGUGUGC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Mdo-Mir-1541 Sha-Mir-1541 |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 18383837-18383896 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCAGCAUUCUCAAUGGCCCUCAACCUGUGACAUCCCAACUGGGCACACUGUUGUGAUGAUAGACAGAUGGUGUGCUUGUUUGGAUGUGGCAGUUUGUAAUGGGACCAACAUCCGGUGAUGet precursor sequence |
| Structure | 10 20 30 40 50 UCCAGCAUUCUCAAUGGCCCU--| C G C U GUGAUG CAA CUGU ACAUCC AAC GGGCACACUGUU \ GUU GACG UGUAGG UUG UUCGUGUGGUAG A UAGUGGCCUACAACCAGGGUAAU^ U G U - ACAGAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Neu-Mir-1541_5p* |
| mirBase accession | None |
| Sequence |
0- ACAUCCCAACUGGGCACACUGUU -23
Get sequence
|
| Mature sequence | Neu-Mir-1541_3p |
| mirBase accession | None |
| Sequence |
38- UGGUGUGCUUGUUUGGAUGUGG -60
Get sequence
|
