| MirGeneDB ID | Neu-Mir-1542 |
|---|---|
| Family name | MIR-1542 (all species) |
| Seed | AUUGAUC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Mdo-Mir-1542 Sha-Mir-1542 |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 290443429-290443490 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCGACGGAUCUCCAAAGCCUAGUCCAGUGCCUGGCACAUAGGAGCUUCAUAAAUGUGUGUUCAUUUAUUUAUUGAUCUCCAAUGCCUAGCACUGUGCCUGGCAAUAAGAACUUCAUAAAGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 AUCGACGGAUCUCCAAA--| UA UC CU CAUA CU - UGUGUG GCC G CAGUGC GGCA GGAG UCA UAAA U CGG C GUCACG CCGU CCUC AGU AUUU U GGAAAUACUUCAAGAAUAA^ UC GU AU AA-- U- U AUUUAC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UGUG in loop |
| Star sequence | Neu-Mir-1542_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUGGCACAUAGGAGCUUCAUAAA -24
Get sequence
|
| Mature sequence | Neu-Mir-1542_3p |
| mirBase accession | None |
| Sequence |
40- UAUUGAUCUCCAAUGCCUAGCA -62
Get sequence
|
