MirGeneDB ID | Neu-Mir-7333 |
---|---|
Family name | MIR-7333 (all species) |
Seed | CUGUUGC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Mdo-Mir-7333 Sha-Mir-7333 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 461904188-461904245 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | ACUGACAACGCUUGACAGGAGAGUAGAGGCAAUUAUAUUCAGUCAACAGACCCUUUUAUACAUGAGUCUGUUGCCUGAAUAUAGUCACCUCCACACUCCACUUCACAUCGCACCGGAGGet precursor sequence |
Structure | 10 20 30 40 50 ACUGACAACGCUUGACA--| A A CA U CCUUUU GGAG GU GAGG AUUAUAUUCAG CAACAGAC A CCUC CA CUCC UGAUAUAAGUC GUUGUCUG U GAGGCCACGCUACACUUCA^ A C AC C AGUACA 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Star sequence | Neu-Mir-7333_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AAUUAUAUUCAGUCAACAGACC -22
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|
Mature sequence | Neu-Mir-7333_3p |
mirBase accession | None |
Sequence |
36- UCUGUUGCCUGAAUAUAGUCAC -58
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|