| MirGeneDB ID | Mdo-Mir-7333 |
|---|
| Family name |
MIR-7333 (all species) |
|---|
| Seed |
CUGUUGC |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7333
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Neu-Mir-7333
Sha-Mir-7333
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(monDom5_add) |
6: 214453341-214453398 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUGACAACGUUUGACAGGAGAGUAGAGGCAAUUAUAUUCAGUCAACAGACCCUUUUAUACAUGAGUCUGUUGCCUGAAUAUAGUCACCUCCACACUCCACUUCACAUCGCACCAGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGACAACGUUUGACA--| A A CA U CCUUUU
GGAG GU GAGG AUUAUAUUCAG CAACAGAC A
CCUC CA CUCC UGAUAUAAGUC GUUGUCUG U
GAGACCACGCUACACUUCA^ A C AC C AGUACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7333_5p* |
| mirBase accession | MIMAT0028674 |
|---|
| Sequence |
0- AAUUAUAUUCAGUCAACAGACC -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7333-5p
|
|---|
| Mature sequence |
Mdo-Mir-7333_3p |
| mirBase accession | MIMAT0028675 |
|---|
| Sequence |
36- UCUGUUGCCUGAAUAUAGUCAC -58
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7333-3p
|
|---|
