MirGeneDB ID | Neu-Mir-7378 |
---|---|
Family name | MIR-7378 (all species) |
Seed | UGGGACA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Mdo-Mir-7378 Sha-Mir-7378 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 95921105-95921163 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | AAGUGAUCAGGGUACUACUGAUUGACUGGAGUGGGACAUCUUCCAUGGAACUGGAUAUGCAUGAUAGCCCCUUAGGAGAUGUCCCAGUUCAGAAAAUCAGCCCUGCGACAUUUCCAAAAGet precursor sequence |
Structure | 10 20 30 40 50 AAGUGAUCAGGGUACUA--| GA G CAU AA GGAUAU CUGAUU CUGGA UGGGACAUCUUC GG CU \ GACUAA GACUU ACCCUGUAGAGG CC GA G AAAACCUUUACAGCGUCCC^ AA G AUU CC UAGUAC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | CNNC at 3p(+17) |
Mature sequence | Neu-Mir-7378_5p (predicted) |
mirBase accession | None |
Sequence |
0- GUGGGACAUCUUCCAUGGAACU -22
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|
Co-mature sequence | Neu-Mir-7378_3p (predicted) |
mirBase accession | None |
Sequence |
37- CCCCUUAGGAGAUGUCCCAGUU -59
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|