| MirGeneDB ID | Neu-Mir-7383-P5a |
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| Family name |
MIR-7383 (all species) |
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| Seed |
AAGGUAC |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-7383-P5b
Neu-Mir-7383-P5c
Neu-Mir-7383-P6
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| Orthologues |
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 19451016-19451074 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCUCUCACCUCCUCAUGACUGGAGUAUUCCAAGGUACCUGAGGUCCUCUUAUUUUAUAUUGGUUGUAAGAGGCUCCAGCUCCCUUUGUCUACCCCAGUAUAAAACUCCACUCCCACUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCUCUCACCUCCUCAUG--| A UUCC UAC AG U UUUUAU
ACUGG GUA AAGG CUG G CCUCUUA A
UGACC CAU UUCC GAC C GGAGAAU U
GUCACCCUCACCUCAAAAUA^ C CUGU CUC CU - GUUGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut +1 on both arms. |
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-7383-P5a_5p |
| mirBase accession | None |
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| Sequence |
0- CAAGGUACCUGAGGUCCUCUUA -22
Get sequence
|
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| Star sequence |
Neu-Mir-7383-P5a_3p* |
| mirBase accession | None |
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| Sequence |
38- AGAGGCUCCAGCUCCCUUUGU -59
Get sequence
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