| MirGeneDB ID | Neu-Mir-7383-P5c |
|---|---|
| Family name | MIR-7383 (all species) |
| Seed | AAGGUAC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-7383-P5a Neu-Mir-7383-P5b Neu-Mir-7383-P6 |
| Orthologues | |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 19451016-19451074 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUCUCUCACCUCCUCAUGACUGGAGUAUUCCAAGGUACCUGAGGUCCUCUUAUUUUAUAUUGGUUGUAAGAGGCUCCAGCUCCCUUUGUCUACCCCAGUAUAAAACUCCACUCCCACUGGet precursor sequence |
| Structure | 10 20 30 40 50 UUCUCUCACCUCCUCAUG--| A UUCC UAC AG U UUUUAU ACUGG GUA AAGG CUG G CCUCUUA A UGACC CAU UUCC GAC C GGAGAAU U GUCACCCUCACCUCAAAAUA^ C CUGU CUC CU - GUUGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | There is a second Dicer cut +1 on both arms. |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-7383-P5c_5p |
| mirBase accession | None |
| Sequence |
0- CAAGGUACCUGAGGUCCUCUUA -22
Get sequence
|
| Star sequence | Neu-Mir-7383-P5c_3p* |
| mirBase accession | None |
| Sequence |
38- AGAGGCUCCAGCUCCCUUUGU -59
Get sequence
|
