MirGeneDB ID | Neu-Mir-7385-o3 |
---|---|
Family name | MIR-7385 (all species) |
Seed | UAUCAGG |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7385-o2 Neu-Mir-7385-o4 Neu-Mir-7385-o5 Neu-Mir-7385-o6 Neu-Mir-7385-o7 Neu-Mir-7385-o8 |
Orthologues | Mdo-Mir-7385-P3 |
Node of Origin (locus) | N. eugenii |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 12016212-12016270 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | UUGAACUGUUCAACAUCCAAGGUCACUUCUAUAUCAGGUAUUCUAUCUUUUUGUGAUGUAAAACUUAAAAGGUAGUCUAUCAGAUACGGAGGUGGCCUUUGUCUAUCAGCUUCCUCAGCGet precursor sequence |
Structure | 10 20 30 40 50 UUGAACUGUUCAACAUCC--| UA A UU UGUGAUG AAGGUCACUUC UAUC GGUA CUAUCUUUU \ UUCCGGUGGAG AUAG CUAU GAUGGAAAA U CGACUCCUUCGACUAUCUGU^ GC A CU UUCAAAA 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17), UGUG in loop |
Mature sequence | Neu-Mir-7385-o3_5p |
mirBase accession | None |
Sequence |
0- AUAUCAGGUAUUCUAUCUUUUU -22
Get sequence
|
Co-mature sequence | Neu-Mir-7385-o3_3p |
mirBase accession | None |
Sequence |
37- AAAGGUAGUCUAUCAGAUACGG -59
Get sequence
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