MirGeneDB ID | Neu-Mir-7394-P3 |
---|---|
Family name | MIR-7394 (all species) |
Seed | GUGACCU |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7394-P1 Neu-Mir-7394-P2 |
Orthologues | Mdo-Mir-7394-P3 Sha-Mir-7394-P3 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 62677964-62678017 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUGGUAUCAUCAGACUUGGGUUACCCAGCUACAUGUAUGCUCUGGUUACUUGUUGCACUACAUGUGACCUUAGCAUACAUGUUCCUGUGCAUACCUCUGUACUUCAGUGGCCUCGet precursor sequence |
Structure | 10 20 30 40 50 CUGGUAUCAUCAGACUU- UACC-| CU CU U UUG GGGU CAG ACAUGUAUGCU GGUUAC UG C UCCA GUC UGUACAUACGA CCAGUG AC A CUCCGGUGACUUCAUGUC UACGU^ CU UU U AUC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | NO |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Star sequence | Neu-Mir-7394-P3_5p* |
mirBase accession | None |
Sequence |
0- ACAUGUAUGCUCUGGUUACUUG -22
Get sequence
|
Mature sequence | Neu-Mir-7394-P3_3p |
mirBase accession | None |
Sequence |
32- UGUGACCUUAGCAUACAUGUUC -54
Get sequence
|