| MirGeneDB ID | Npo-Mir-12504 |
|---|---|
| Family name | MIR-12504 (all species) |
| Seed | UUGCUAU |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12504 Obi-Mir-12504 Ovu-Mir-12504 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010002266.1: 27541-27599 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | CACAGGAAGUAGUUCCCAGGCUGUUCCGGUAUUGCUAUGCGAAUGACUGUUUCACUACCAGCAGCUGACAUUUAUCCGCAUAACAAUACCAGAGCAAGCCCUGUUACCGCCUGUUGAAAGet precursor sequence |
| Structure | 10 20 30 40 50 CACAGGAAGUAGUUCCCA- -| C C A C UCACUAC GGC UGUUC GGUAUUG UAUGCG AUGA UGUU \ CCG ACGAG CCAUAAC AUACGC UAUU ACAG C AAAGUUGUCCGCCAUUGUC A^ A A C U UCGACGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-12504_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUUGCUAUGCGAAUGACUGUUU -22
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|
| Star sequence | Npo-Mir-12504_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- ACAUUUAUCCGCAUAACAAUAC -59
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|
