MirGeneDB 3.0
MirGeneDB ID

Nve-Mir-2043-P2a

Family name MIR-2043 (all species)
Seed AUAUCGC
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2043-1
Paralogues Nve-Mir-2043-P1  Nve-Mir-2043-P2b 
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)		 NW_001834400.1: 1324956-1325006 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2043-P2a)		 Mir-2043-P1 NW_001834400.1: 1321803-1321853 [+] Ensembl
Mir-2043-P2a NW_001834400.1: 1324956-1325006 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAGAGACCGUAUCUGAUAUCGAAUCUCUUAUAUCGCCUUUUGAGGUUAUUUUCUUAAUACCCUCAAAAGACGGUAUUAGAGAUUACACAGCUGGACAAUCGUUGCUUGA
Get precursor sequence
Structure
        10        20          30        40        50     
CCAAGAGACCGUAUCUGAUAUCG--|      U      C         U    UU 
                         AAUCUCU AUAUCG CUUUUGAGG UAUU  \
                         UUAGAGA UAUGGC GAAAACUCC AUAA  C
AGUUCGUUGCUAACAGGUCGACACA^      U      A         C    UU 
 .       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Bl Ju La Pr
Mature sequence

Nve-Mir-2043-P2a_5p
mirBase accessionMIMAT0009810
Sequence 
0- UAUAUCGCCUUUUGAGGUUAUU -22
Get sequence
Star sequence

Nve-Mir-2043-P2a_3p*
mirBase accessionMIMAT0009811
Sequence 
29- UACCCUCAAAAGACGGUAUUAG -51
Get sequence