| MirGeneDB ID | Nve-Mir-9424-P2 |
|---|
| Family name |
MIR-9424 (all species) |
|---|
| Seed |
AUAGUUG |
|---|
| Species |
Starlet sea anemone (Nematostella vectensis) |
|---|
| MiRBase ID |
nve-mir-9424a
|
|---|
| Paralogues |
Nve-Mir-9424-P1
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
N. vectensis
|
|---|
| Node of Origin (family) |
N. vectensis
|
|---|
Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834350.1: 776993-777046 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCAAGCUCAUCAGACACCGUCCUUAAAGACUGCCUCGAUAAACCAGCUUUACAGAUAUCUGUAUAGUUGGCUCAUCGAGGCAGUCUUAAAUGACGGUAUGUCCAAGACUGUUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAAGCUCAUCAGACAC--| C A AAA U GA
CGUC UU AAGACUGCCUCGAU CCAGCU UACA U
GCAG AA UUCUGACGGAGCUA GGUUGA AUGU A
CUUUGUCAGAACCUGUAUG^ U A CUC U CU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Nve-Mir-9424-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGCCUCGAUAAACCAGCUUUACA -23
Get sequence
|
|---|
| Mature sequence |
Nve-Mir-9424-P2_3p |
| mirBase accession | MIMAT0035383 |
|---|
| Sequence |
31- UAUAGUUGGCUCAUCGAGGCAGU -54
Get sequence
|
|---|
