MirGeneDB ID | Oan-Mir-1416 |
Family name |
MIR-1416 (all species) |
Seed |
CCUUAAC |
Species |
Platypus (Ornithorhynchus anatinus) |
MiRBase ID |
oan-mir-1416
|
Paralogues |
|
Orthologues |
Ami-Mir-1416
Cli-Mir-1416
Cpi-Mir-1416
Gga-Mir-1416
Tgu-Mir-1416
|
Node of Origin (locus) |
Amniota
|
Node of Origin (family) |
Amniota
|
Genome context (mOrnAna1.p.v1_plustraces) |
NC_041753.1: 57421839-57421895 [+]
|
Precursor (pre-Mir +30nt flank) |
CUGGGCAAGUAACCAAUGGCUGUCACUCUUUCCUUAACUCAUGCCGCUGUGCAUUCUCUUCUUUCGCAACAGGGUGGGUUGAGUACAAAGUGCCGGUCUAAUCCAGCUAAUUCUUGA
Get precursor sequence
|
Structure | 10 20 30 40 50
CUGGGCAAGUAACCAAU--| U CUUUC AU G - AUUCUC
GGCUG CACU CUUAACUC GCC CUGU GC \
CUGGC GUGA GAGUUGGG UGG GACA CG U
AGUUCUUAAUCGACCUAAU^ C AACAU -- - A CUUUCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Oan-Mir-1416_5p |
mirBase accession | MIMAT0007271 |
Sequence |
0- UCCUUAACUCAUGCCGCUGUGC -22
Get sequence
|
Star sequence |
Oan-Mir-1416_3p* (predicted) |
mirBase accession | None |
Sequence |
37- AACAGGGUGGGUUGAGUACA -57
Get sequence
|