| MirGeneDB ID | Obi-Mir-12518 |
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| Family name |
MIR-12518 (all species) |
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| Seed |
AUUAGAA |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Esc-Mir-12518
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ423850: 36544-36600 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACUUUGGUGUGUGUGUGUGAAUACCCGAAUAUUAGAAAGUCGUAAGUGUCAAUUAUUUAGUUUGACACCUGCGAGUUUCUAACAAACGGUUGUUCAUUUAUUCAACAACAGAAGAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACUUUGGUGUGUGUGU--| C AAUA G A AUUAU
GUGAAUA CCG UUAGAAA UCGUA GUGUCA \
UACUUGU GGC AAUCUUU AGCGU CACAGU U
UAGAAGACAACAACUUAUU^ U AAAC G C UUGAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12518_5p |
| mirBase accession | None |
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| Sequence |
0- UAUUAGAAAGUCGUAAGUGUCA -22
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12518_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- ACACCUGCGAGUUUCUAACAAA -57
Get sequence
|
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