MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12521-v1

Family name MIR-12521 (all species)
Seed UUAGUGC
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12521-v2  Obi-Mir-12521-v3 
Orthologues Esc-Mir-12521-v1  Ovu-Mir-12521-v1 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ432289: 1359-1420 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
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Structure
        10          20        30        40        50        60
CAAGAAGAUUAGAGUAC--|    CGA        UG        A      AUUCAUUUC 
                   AAUUC   UCGUUAGC  GUUAUGUG ACUAAG         C
                   UUAAG   AGUAGUCG  CAAUACAC UGAUUU         U
CUAAAGGCUCUGCUAUUGU^    AUA        GU        G      AUAAACUAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Obi-Mir-12521-v1_5p*

mirBase accessionNone
Sequence
0- AGCUGGUUAUGUGAACUAAGAU -22
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Mature sequence

Obi-Mir-12521-v1_3p

mirBase accessionNone
Sequence
40- UUUAGUGCACAUAACUGGCUGA -62
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