MirGeneDB ID | Obi-Mir-12521-v1 |
Family name |
MIR-12521 (all species) |
Seed |
UUAGUGC |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
Obi-Mir-12521-v2
Obi-Mir-12521-v3
|
Orthologues |
Esc-Mir-12521-v1
Ovu-Mir-12521-v1
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (PRJNA270931_OBI) |
KQ432289: 1359-1420 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAAGAAGAUUAGAGUAC--| CGA UG A AUUCAUUUC
AAUUC UCGUUAGC GUUAUGUG ACUAAG C
UUAAG AGUAGUCG CAAUACAC UGAUUU U
CUAAAGGCUCUGCUAUUGU^ AUA GU G AUAAACUAU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Obi-Mir-12521-v1_5p* |
mirBase accession | None |
Sequence |
0- AGCUGGUUAUGUGAACUAAGAU -22
Get sequence
|
Mature sequence |
Obi-Mir-12521-v1_3p |
mirBase accession | None |
Sequence |
40- UUUAGUGCACAUAACUGGCUGA -62
Get sequence
|