| MirGeneDB ID | Obi-Mir-12521-v3 |
|---|
| Family name |
MIR-12521 (all species) |
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| Seed |
AUUUAGU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12521-v1
Obi-Mir-12521-v2
|
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| Orthologues |
Esc-Mir-12521-v3
Ovu-Mir-12521-v3
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ432289: 1359-1420 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAGAAGAUUAGAGUAC-- CGA UG A -| CAUUUC
AAUUC UCGUUAGC GUUAUGUG ACUAAG AUU \
UUAAG AGUAGUCG CAAUACAC UGAUUU UAA C
CUAAAGGCUCUGCUAUUGU AUA GU G A^ ACUAUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12521-v3_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCUGGUUAUGUGAACUAAGAUUC -24
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12521-v3_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UAUUUAGUGCACAUAACUGGCUGA -62
Get sequence
|
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