| MirGeneDB ID | Ovu-Mir-12566-P2 |
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| Family name |
MIR-12566 (all species) |
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| Seed |
GUGAUUU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Mir-12566-P1
Ovu-Mir-12566-P3
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| Orthologues |
Obi-Mir-12566-P2
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01027681.1: 324639-324697 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUUUUCUGAUUUGUUGCUUUUGAUGACAAGUGAUUUGGAACGCAUUUAGCAGUAUGUUAAAUUCUGAAAUGCGAUCCAAAUCACUUGAUAUGAUUAGCACUGCGACUGAUGGAUGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAAUUUUCUGAUUUGUU--| UUUG A A AG UAUGU
GCU AUG CAAGUGAUUUGGA CGCAUUU CAG \
CGA UAU GUUCACUAAACCU GCGUAAA GUC U
CAGUAGGUAGUCAGCGUCA^ UUAG A A -- UUAAA
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
Ov |
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| Mature sequence |
Ovu-Mir-12566-P2_5p |
| mirBase accession | None |
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| Sequence |
0- AGUGAUUUGGAACGCAUUUAGCAG -24
Get sequence
|
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| Star sequence |
Ovu-Mir-12566-P2_3p* |
| mirBase accession | None |
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| Sequence |
37- GAAAUGCGAUCCAAAUCACUUG -59
Get sequence
|
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