MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12566-P2

Family name MIR-12566 (all species)
Seed GUGAUUU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12566-P1  Obi-Mir-12566-P3 
Orthologues Ovu-Mir-12566-P2 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ417213: 420569-420627 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUUUGCUGAUUUGUUGCUUUUGAUGACAAGUGAUUUGGAACGCAUUUAGCAGUAUGUUAAAUUCUGAAAUGCGAUCCAAAUCACUUGACAUGAUUAGCACUGCGACUGUUGGAUGAC
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Structure
        10          20        30        40        50          
AAAUUUGCUGAUUUGUU--|  UUUG   A             A       AG   UAUGU 
                   GCU    AUG CAAGUGAUUUGGA CGCAUUU  CAG     \
                   CGA    UAC GUUCACUAAACCU GCGUAAA  GUC     U
CAGUAGGUUGUCAGCGUCA^  UUAG   A             A       --   UUAAA 
       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Mir-12566-P2_5p

mirBase accessionNone
Sequence
0- AGUGAUUUGGAACGCAUUUAGCAG -24
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Star sequence

Obi-Mir-12566-P2_3p*

mirBase accessionNone
Sequence
37- GAAAUGCGAUCCAAAUCACUUG -59
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